{"type":"video","version":"1.0","html":"<iframe src=\"https://www.loom.com/embed/9c7f26770d2b446dadfea12f31550fee\" frameborder=\"0\" width=\"1662\" height=\"1246\" webkitallowfullscreen mozallowfullscreen allowfullscreen></iframe>","height":1246,"width":1662,"provider_name":"Loom","provider_url":"https://www.loom.com","thumbnail_height":1246,"thumbnail_width":1662,"thumbnail_url":"https://cdn.loom.com/sessions/thumbnails/9c7f26770d2b446dadfea12f31550fee-c6273981678a7578.gif","duration":148.417,"title":"Identifying Druggable Binding Sites in Protein Structures","description":"In this video, I walk you through the Pocket Search Engine, which helps identify druggable binding sites in protein structures. We start by inputting a PDB file of the AXL protein without an inhibitor, and I guide you on how to create a PocketSearch pipeline. Once created, you can analyze the pockets and their chemical properties, such as drugability and hydrophobicity. I encourage you to explore the extensive analytics provided and consider backing up your findings with relevant literature or existing inhibitors. Please make sure to check the documentation for more advanced settings if you're interested."}